dbacp00314
General Description
Peptide name : (HHPHG)3
Source/Organism : Synthetic Peptide
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : HHPHGHHPHGHHPHG
Peptide length: 15
C-terminal modification: Linear
N-terminal modification : Free
Non-natural peptide information: None
Activity Information
Assay type : Tropomyosin binding assay
Assay time : Not found
Activity : IC50 : 1.25 µM
Cell line : Not found
Cancer type : Tumor
Other activity : Not found
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1714.7685 Dalton
Aliphatic index : 0
Instability index : -17.166
Hydrophobicity (GRAVY) : -2.32
Isoelectric point : 7.317
Charge (pH 7) : 0.5447
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 0.66666666
hydrophobic moment : -0.084
Missing amino acid : W,T,I,M,E,K,F,D,N,C,R,Q,S,Y,L,A,V
Most occurring amino acid : H
Most occurring amino acid frequency : 9
Least occurring amino acid : P
Least occurring amino acid frequency : 3
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0, 0.4, 0)
SMILES Notation: N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)NCC(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)NCC(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)NCC(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | TCTTTTCTTTCCTTT |
| Chou-Fasman (CF) | CCCCCCCCCCCCCCC |
| Neural Network (NN) | CCCCCCCCCCCCCCC |
| Joint/Consensus | CCCCCCCCCCCCCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Doñate F, et al. Peptides derived from the histidine-proline domain of the histidine-proline-rich glycoprotein bind to tropomyosin and have antiangiogenic and antitumor activities. Cancer Res. 2004; 64:5812-7. doi: 10.1158/0008-5472.CAN-04-0440
Literature
Paper title : Peptides derived from the histidine-proline domain of the histidine-proline-rich glycoprotein bind to tropomyosin and have antiangiogenic and antitumor activities.
Doi : https://doi.org/10.1158/0008-5472.CAN-04-0440
Abstract : The antiangiogenic activity of the multidomain plasma protein histidine-proline-rich glycoprotein (HPRG) is localized to its histidine-proline-rich (H/P) domain and has recently been shown to be mediated, at least partially, through binding to cell-surface tropomyosin in fibroblast growth factor-2-activated endothelial cells (X. Guan et al., Thromb Haemost, in press). HPRG and its H/P domain, but not the other domains of HPRG, bind specifically and with high affinity to tropomyosin. In this study, we characterize the interaction of the H/P domain with tropomyosin and delineate the region within the H/P domain responsible for that interaction. The H/P domain of HPRG consists mostly of repetitions of the consensus sequence [H/P][H/P]PHG. Applying an in vitro tropomyosin binding assay, we demonstrate that the synthetic peptide HHPHG binds to tropomyosin in vitro and inhibits angiogenesis and tumor growth in vivo. The affinity for tropomyosin increases exponentially upon multimerization of the HHPHG sequence, with a concurrent increase in antiangiogenic activity. Specifically, the tetramer (HHPHG)4 has significant antiangiogenic activity in the Matrigel plug model (IC50 approximately 600 nm) and antitumor effects in two syngeneic mouse tumor models. Thus, we show that a 16-mer peptide analogue mimics the antiangiogenic activity of intact HPRG and is also able to inhibit tumor growth, suggesting that cell surface tropomyosin may represent a novel antiangiogenic target for the treatment of cancer.