dbacp01850
General Description
Peptide name : BmKn2
Source/Organism : Venom, Chinese scorpion
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : FIGAIARLLSKIF
Peptide length: 13
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information: None
Activity Information
Assay type : Not specified
Assay time : Not found
Activity : Not found
Cell line : Not found
Cancer type : Not found
Other activity : Anti-microbial activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1448.7933 Dalton
Aliphatic index : 1.653
Instability index : -3.8308
Hydrophobicity (GRAVY) : 1.5923
Isoelectric point : 11.000
Charge (pH 7) : 1.7591
Aromaticity : 0.153
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 3.33333333
hydrophobic moment : 1.1381
Missing amino acid : C,W,H,Q,T,P,M,E,D,Y,N,V
Most occurring amino acid : I
Most occurring amino acid frequency : 3
Least occurring amino acid : G
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.3, 0.1, 0.5)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](C)NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H](N)Cc1ccccc1)[C@@H](C)CC)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)[C@@H](C)CC
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EHHHHHHHHHHHE |
| Chou-Fasman (CF) | EEHHHHHHEECCC |
| Neural Network (NN) | HHHHHHHHHHHHC |
| Joint/Consensus | CHHHHHHHHHHHC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Zeng XC, et al. Identification and functional characterization of novel scorpion venom peptides with no disulfide bridge from Buthus martensii Karsch. Peptides. 2004; 25:143-50. doi: 10.1016/j.peptides.2003.12.003
Literature
Paper title : Identification and functional characterization of novel scorpion venom peptides with no disulfide bridge from Buthus martensii Karsch.
Doi : https://doi.org/10.1016/j.peptides.2003.12.003
Abstract : The scorpion venom peptides with no disulfide bridge are rarely identified and poorly characterized so far. Here, we report the identification and characterization of four novel disulfide-bridge-free venom peptides (BmKa1, BmKa2, BmKb1 and BmKn2) from Buthus martensii Kasch. BmKa1 and BmKa2 are very acidic and hydrophilic, showing no any similarity to other proteins, whereas BmKb1 and BmKn2 both are basic, alpha-helical peptide with an amidated C-terminus, showing a little homology with other peptides. Functional tests with synthetic peptide showed that BmKn2 has strong antimicrobial activity against both Gram-positive and Gram-negative bacteria, whereas BmKb1 has weak activity in inhibiting the growth of these bacteria.