dbacp01907
General Description
Peptide name : BPC98
Source/Organism : Synthetic Peptide
Linear/Cyclic : Cyclic
Chirality : L
Sequence Information
Sequence : LLKKKFKKLQ
Peptide length: 10
C-terminal modification: Cyclic
N-terminal modification : Not found
Non-natural peptide information: None
Activity Information
Assay type : MTT assay
Assay time : 48h
Activity : IC50 : 40.7 ± 3 μM
Cell line : MDA-MB-231
Cancer type : Cervical cancer
Other activity : Hemolytic activity; Anti-microbial activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1273.6526 Dalton
Aliphatic index : 1.17
Instability index : 9.59
Hydrophobicity (GRAVY) : -0.88
Isoelectric point : 10.602
Charge (pH 7) : 4.7551
Aromaticity : 0.1
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 0.66666666
hydrophobic moment : 0.2168
Missing amino acid : W,T,P,I,M,E,D,N,G,C,R,H,S,Y,A,V
Most occurring amino acid : K
Most occurring amino acid frequency : 5
Least occurring amino acid : F
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.8, 0, 0.4)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CC(C)C)C(=O)N[C@@H](CCC(N)=O)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHHHHHHH |
| Chou-Fasman (CF) | HHHHHHHCCC |
| Neural Network (NN) | HHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID : Not available
Reference
1 : Feliu L, et al. Antimicrobial cyclic decapeptides with anticancer activity. Peptides. 2010; 31:2017-26. doi: 10.1016/j.peptides.2010.07.027
Literature
Paper title : Antimicrobial cyclic decapeptides with anticancer activity.
Doi : https://doi.org/10.1016/j.peptides.2010.07.027
Abstract : Antimicrobial peptides have been considered as potential candidates for cancer therapy. We report here the cytotoxicity of a library of 66 antibacterial cyclodecapeptides on human carcinoma cell lines, and their effects on apoptosis [as assessed by cleavage of poly(ADP-ribose) polymerase (PARP)] and cell signaling proteins (p53 and ERK1/2) in cultured human cervical carcinoma cells. A design of experiments approach permitted to analyze the results of a subset of 16 peptides and define rules for high anticancer activity against MDA-MB-231 breast carcinoma cells. Eight peptides were identified with IC(50) values ranging from 18.5 to 57.5 μM against the five cell lines tested, being HeLa cells the most sensitive. Among these sequences, BPC88, BPC96, BPC98, and BPC194 displayed specificity and high cytotoxicity against HeLa cells (IC(50) of 22.5-38.5 μM), showed low hemolytic activity and low cytotoxicity to non-malignant fibroblasts, and were stable to proteases in human serum. Induction of apoptosis by these peptides was observed and the apoptotic effect of BPC88 and BPC96 caused a marked decrease on the activated form of ERK1/2 kinase and an induction of p53. We further showed that BPC96 at low doses synergized the cytotoxic effect of cisplatin. These findings suggest that cyclic decapeptides may represent novel anticancer agents providing a new strategy in cancer therapy.