dbacp01935
General Description
Peptide name : Brevinin-1BYa
Source/Organism : Skin secretions, the foothill yellow-legged frog, North America
Linear/Cyclic : Not found
Chirality : L
Sequence Information
Sequence : FLPILASLAAKFGPKLFCLVTKKC
Peptide length: 24
C-terminal modification: Not found
N-terminal modification : Free
Non-natural peptide information: None
Activity Information
Assay type : Not specified
Assay time : Not found
Activity : Not found
Cell line : Not found
Cancer type : Not found
Other activity : Anti-bacterial activity; Anti-fungal activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 2609.2849 Dalton
Aliphatic index : 1.220
Instability index : 26.5833
Hydrophobicity (GRAVY) : 1.075
Isoelectric point : 9.7013
Charge (pH 7) : 3.7363
Aromaticity : 0.125
Molar extinction coefficient (cysteine, cystine): (0, 125)
Hydrophobic/hydrophilic ratio : 3
hydrophobic moment : 0.2505
Missing amino acid : R,W,H,Q,M,E,D,Y,N
Most occurring amino acid : L
Most occurring amino acid frequency : 5
Least occurring amino acid : I
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.5, 0.1, 0.4)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1ccccc1)C(=O)NCC(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CS)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CS)C(=O)O)[C@@H](C)O)C(C)C
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | ECHHHHHHHHHTCCHHHHHHHTTT |
| Chou-Fasman (CF) | EECCHHHHHHCCCCCCEEEECCCC |
| Neural Network (NN) | CCHHHHHHHHCCCCCHHHHHHCCC |
| Joint/Consensus | CCHHHHHHHHCCCCCHHHHHHCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Pál T, et al. Brevinin-1BYa: a naturally occurring peptide from frog skin with broad-spectrum antibacterial and antifungal properties. Int J Antimicrob Agents. 2006; 27:525-9. doi: 10.1016/j.ijantimicag.2006.01.010
Literature
Paper title : Brevinin-1BYa: a naturally occurring peptide from frog skin with broad-spectrum antibacterial and antifungal properties.
Doi : https://doi.org/10.1016/j.ijantimicag.2006.01.010
Abstract : Brevinin-1BYa (FLPILASLAAKFGPKLFCLVTKKC) is a cationic alpha-helical peptide containing an intramolecular disulphide bridge that is present in skin secretions of the foothill yellow-legged frog Rana boylii. A synthetic replicate of the peptide showed growth inhibitory activity against a range of reference strains of Gram-positive and Gram-negative bacteria, against clinical isolates of methicillin-resistant Staphylococcus aureus (MRSA) (minimum inhibitory concentration (MIC)=2.5 microM), and against reference strains and clinical isolates of the opportunistic yeast pathogens Candida albicans, Candida tropicalis, Candida krusei and Candida parapsilosis (MIC<or=10 microM). However, the therapeutic potential of the peptide, especially for systemic applications, is restricted by its high haemolytic activity against human erythrocytes (LD50=10 microM). Replacement of the cysteine residues in brevinin-1BYa by serine produced an acyclic analogue with eight-fold reduced haemolytic activity that retained high potency against Gram-positive bacteria, including strains of MRSA (MIC=5 microM), however activities against Gram-negative bacteria and yeast species were reduced. It is suggested that brevinin-1BYa represents a candidate for drug development, particularly for topical applications against antibiotic-resistant microorganisms.