dbacp02107
General Description
Peptide name : Buthus Occitanus RK1
Source/Organism : Common yellow scorpion RK1
Linear/Cyclic : Not found
Chirality : Not found
Sequence Information
Sequence : IDCSKVNLTAECSS
Peptide length: 14
C-terminal modification: Not found
N-terminal modification : Not found
Non-natural peptide information: None
Activity Information
Assay type : MTT assay, Cell proliferation assay
Assay time : 72h
Activity : MIC 50 : approx. 2 µM
Cell line : IGR39
Cancer type : EpCAM-expressing cells
Other activity : Not found
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1469.6373 Dalton
Aliphatic index : 0.835
Instability index : 48.3643
Hydrophobicity (GRAVY) : 0.1286
Isoelectric point : 4.3702
Charge (pH 7) : -1.2568
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 125)
Hydrophobic/hydrophilic ratio : 0.75
hydrophobic moment : 0.1648
Missing amino acid : R,W,H,Q,P,M,F,Y,G
Most occurring amino acid : S
Most occurring amino acid frequency : 3
Least occurring amino acid : I
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.2, 0.3, 0.2)
SMILES Notation: CC[C@H](C)[C@H](N)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CS)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CS)C(=O)N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)O)[C@@H](C)O)C(C)C
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EHTTTTTCCHHHTT |
| Chou-Fasman (CF) | CCCCCCHHHHCCCC |
| Neural Network (NN) | CCCCCCCCCHCCCC |
| Joint/Consensus | CCCCCCCCCCCCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Khamessi O, et al. RK1, the first very short peptide from Buthus occitanus tunetanus inhibits tumor cell migration, proliferation and angiogenesis. Biochem Biophys Res Commun. 2018; 499:1-7. doi: 10.1016/j.bbrc.2018.01.133
Literature
Paper title : RK1, the first very short peptide from Buthus occitanus tunetanus inhibits tumor cell migration, proliferation and angiogenesis.
Doi : https://doi.org/10.1016/j.bbrc.2018.01.133
Abstract : Scorpion toxins have been the subject of many studies which explore their pharmacological potential toward diverse molecular targets, known to monitor key mechanisms in cancer such as proliferation, migration and angiogenesis. The few peptides from scorpion venom that have an anti-tumor effect are generally cytotoxic. Herein, we present the first description of a short 14 amino acid peptide (called RK1), purified from the venom of Buthus occitanus tunetanus, with the particular capabilities, among different other scorpion peptides, to inhibit cell proliferation, migration and angiogenesis of U87 (Glioblastoma) and IGR39 (Melanoma). Moreover, RK1 is a first peptide derived from scorpion venom exhibiting a potential anti-tumoral activity with no manifest toxicity. Our results suggest that, in terms of its primary structure, RK1 is unique compared to a variety of known peptides purified from scorpion venoms. In addition, RK1 is the first natural peptide able to abolish completely the proliferation of cancer cells. The Chicken chorioallantoic membrane model revealed that RK1 strongly inhibits ex-vivo vascular growth. RK1 could open new perspective for the pharmaceutical application of short scorpion venom peptides in anticancer activity and may represent the first member of a new group of scorpion peptides.