dbacp02621
General Description
Peptide name : D-K6L9
Source/Organism : Not found
Linear/Cyclic : Linear
Chirality : Mix
Sequence Information
Sequence : LKlLKKLlkKLLkLL
Peptide length: 15
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information: None
Activity Information
Assay type : Enzyme Immunoassay (EIA)
Assay time : Not found
Activity : LC50 : 3 µMol/L
Cell line : CL-1
Cancer type : Lung cancer
Other activity : Anti-microbial activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1805.4675 Dalton
Aliphatic index : 1.82
Instability index : -35.946
Hydrophobicity (GRAVY) : 0.72
Isoelectric point : 10.699
Charge (pH 7) : 5.7541
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1.75
hydrophobic moment : 0.8405
Missing amino acid : W,T,P,I,M,E,F,D,N,G,C,R,H,Q,S,Y,A,V
Most occurring amino acid : L
Most occurring amino acid frequency : 7
Least occurring amino acid : l
Least occurring amino acid frequency : 2
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (1, 0, 0.6)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@@H](N)CC(C)C)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHHHHHHHHHHHH |
| Chou-Fasman (CF) | HHHHHHHHHHHHCCC |
| Neural Network (NN) | HHHHHHHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHHHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Papo N, et al. Inhibition of tumor growth and elimination of multiple metastases in human prostate and breast xenografts by systemic inoculation of a host defense-like lytic peptide. Cancer Res. 2006; 66:5371-8. doi: 10.1158/0008-5472.CAN-05-4569
Literature
Paper title : Inhibition of tumor growth and elimination of multiple metastases in human prostate and breast xenografts by systemic inoculation of a host defense-like lytic peptide.
Doi : https://doi.org/10.1158/0008-5472.CAN-05-4569
Abstract : We report on a short host defense-like peptide that targets and arrests the growth of aggressive and hormone-resistant primary human prostate and breast tumors and prevents their experimental and spontaneous metastases, respectively, when systemically inoculated to immunodeficient mice. These effects are correlated with increased necrosis of the tumor cells and a significant decrease in the overall tumor microvessel density, as well as newly formed capillary tubes and prostate-specific antigen secretion (in prostate tumors). Growth inhibition of orthotopic tumors derived from stably transfected highly fluorescent human breast cancer cells and prevention of their naturally occurring metastases were visualized in real time by using noninvasive whole-body optical imaging. The exclusive selectivity of the peptide towards cancer derives from its specific binding to surface phosphatidylserine and the killing of the cancer cells via cytoplasmic membrane depolarization. These data indicate that membrane disruption can provide a therapeutic means of inhibiting tumor growth and preventing metastases of various cancers.