dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp03381

General Description

Peptide name : Imcroporin

Source/Organism : Lesser brown scorpion

Linear/Cyclic : Linear

Chirality : Not found

Sequence Information

Sequence : FFSLLPSLIGGLVSAIK

Peptide length: 17

C-terminal modification: Linear

N-terminal modification : Amidation

Non-natural peptide information: None

Activity Information

Assay type : MTT assay

Assay time : 48h

Activity : MIC : 100 µg/ml

Cell line : SMMC-7721

Cancer type : Not found

Other activity : Anti-microbial activity

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 1762.1394 Dalton

Aliphatic index : 1.605

Instability index : 34.3353

Hydrophobicity (GRAVY) : 1.5941

Isoelectric point : 8.7501

Charge (pH 7) : 0.7591

Aromaticity : 0.117

Molar extinction coefficient (cysteine, cystine): (0, 0)

Hydrophobic/hydrophilic ratio : 3.25

hydrophobic moment : 1.386

Missing amino acid : C,R,W,H,Q,T,M,E,D,Y,N

Most occurring amino acid : L

Most occurring amino acid frequency : 4

Least occurring amino acid : P

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (0.3, 0.3, 0.5)

SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)CNC(=O)CNC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)Cc1ccccc1)[C@@H](C)CC)C(C)C)C(=O)N[C@@H](CCCCN)C(=O)O

Secondary Structure :

Method Prediction
GOR EEECCTTEEEEEEEEHH
Chou-Fasman (CF) EECCCEEEEEEEECCCC
Neural Network (NN) HCCCCCCCCCCCEEEHC
Joint/Consensus EECCCCCEEEEEEEECC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 19451300

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID : Not available

Reference

1 : Zhao Z, et al. Imcroporin, a new cationic antimicrobial peptide from the venom of the scorpion Isometrus maculates. Antimicrob Agents Chemother. 2009; 53:3472-7. doi: 10.1128/AAC.01436-08

Literature

Paper title : Imcroporin, a new cationic antimicrobial peptide from the venom of the scorpion Isometrus maculates.

Doi : https://doi.org/10.1128/AAC.01436-08

Abstract : The pace of resistance against antibiotics almost exceeds that of the development of new drugs. As many bacteria have become resistant to conventional antibiotics, new drugs or drug resources are badly needed to combat antibiotic-resistant pathogens, like methicillin-resistant Staphylococcus aureus (MRSA). Antimicrobial peptides, rich sources existing in nature, are able to effectively kill multidrug-resistant pathogens. Here, imcroporin, a new antimicrobial peptide, was screened and isolated from the cDNA library of the venomous gland of Isometrus maculates. The MIC of imcroporin against MRSA was 50 microg/ml, 8-fold lower than that of cefotaxime and 40-fold lower than that of penicillin. Imcroporin killed bacteria rapidly in vitro, inhibited bacterial growth, and cured infected mice. These results revealed that imcroporin could be considered a potential anti-infective drug or lead compound, especially for treating antibiotic-resistant pathogens.