dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp03755

General Description

Peptide name : LHRH–BH3 peptide luteinizing hormone-releasing hormone (LHRH)

Source/Organism : Effectors (BAK, BAX)

Linear/Cyclic : Linear

Chirality : L

Sequence Information

Sequence : QHWSYGLRPGMGQVGRQLAIIGDDINRRY

Peptide length: 29

C-terminal modification: Linear

N-terminal modification : Not found

Non-natural peptide information: None

Activity Information

Assay type : Cytotoxicity assay, MTT assay

Assay time : 48h

Activity : Not found

Cell line : SKOV-3

Cancer type : LHRH negative ovarian cancer

Other activity : Not found

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 3357.7606 Dalton

Aliphatic index : 0.806

Instability index : 37.2828

Hydrophobicity (GRAVY) : -0.727

Isoelectric point : 9.9708

Charge (pH 7) : 1.8475

Aromaticity : 0.103

Molar extinction coefficient (cysteine, cystine): (8480, 8480)

Hydrophobic/hydrophilic ratio : 1.07142857

hydrophobic moment : -0.554

Missing amino acid : C,T,E,K,F

Most occurring amino acid : G

Most occurring amino acid frequency : 5

Least occurring amino acid : H

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (0.1, 0.3, 0.3)

SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@@H](NC(=O)[C@H](CCC(N)=O)NC(=O)CNC(=O)[C@H](CCSC)NC(=O)CNC(=O)[C@@H]1CCCN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CC(C)C)NC(=O)CNC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](CO)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@@H](N)CCC(N)=O)C(C)C)C(=O)N[C@H](C(=O)NCC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)O)[C@@H](C)CC)[C@@H](C)CC

Secondary Structure :

Method Prediction
GOR EEETTTCCCTCCCECCEEEEECCCHHHTE
Chou-Fasman (CF) EEEEECCCCCEEEECCCEEECCCCCCCCC
Neural Network (NN) CCCCCCCCCCCCCCCCEEEECCCCCCCCC
Joint/Consensus EEECCCCCCCCCCCCCEEEECCCCCCCCC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 12817893

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID : Not available

Reference

1 : Dharap SS and Minko T. Targeted proapoptotic LHRH-BH3 peptide. Pharm Res. 2003; 20:889-96. doi: 10.1023/a:1023839319950

Literature

Paper title : Targeted proapoptotic LHRH-BH3 peptide.

Doi : https://doi.org/10.1023/a:1023839319950

Abstract : PURPOSE: The purpose of this work was to construct and evaluate a novel targeted proapoptotic peptide for cancer treatment. METHODS: The peptide consisted of luteinizing hormone-releasing hormone (LHRH) as a targeting moiety specific to LHRH receptors and a synthetic BCL-2 homology 3 (BH3) domain peptide as an apoptosis inducer and a suppressor of antiapoptotic cellular defense. Anticancer activity of the peptide was evaluated on different cancer cell lines. RESULTS: The targeting receptor to LHRH peptide is overexpressed in several cancer cell lines but is not expressed in healthy human visceral organs. LHRH and BH3 peptides when applied separately did not demonstrate cellular toxicity. In contrast, the LHRH-BH3 peptide was toxic in several cancer cell lines. Coincubation of LHRH and LHRH-BH3 peptides significantly decreased cytotoxicity of the latter. It was found that the LHRH-BH3 peptide induced apoptosis by simultaneous inhibition of the antiapoptotic function of BCL-2 protein family and activation of caspase-dependent signaling pathway. CONCLUSIONS: The proposed anticancer proapoptotic LHRH-BH3 peptide simultaneously affects two molecular targets: 1) extracellular cancer-specific LHRH receptors and 2) the intracellular controlling mechanisms of apoptosis. The results of this work may be used to design novel approaches for the treatment of various cancers.