dbacp04316
General Description
Peptide name : Lunasin
Source/Organism : Lima bean
Linear/Cyclic : Not found
Chirality : L
Sequence Information
Sequence : KTCENLADTFRGPCFATSNC
Peptide length: 20
C-terminal modification: Not found
N-terminal modification : Free
Non-natural peptide information: None
Activity Information
Assay type : Not specified
Assay time : Not found
Activity : Not found
Cell line : Not found
Cancer type : Colorectal cancer
Other activity : Anti-fungal activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 2178.4251 Dalton
Aliphatic index : 0.295
Instability index : -5.545
Hydrophobicity (GRAVY) : -0.34
Isoelectric point : 6.0489
Charge (pH 7) : -0.2667
Aromaticity : 0.1
Molar extinction coefficient (cysteine, cystine): (0, 125)
Hydrophobic/hydrophilic ratio : 1
hydrophobic moment : -1.147
Missing amino acid : W,H,Q,M,I,Y,V
Most occurring amino acid : T
Most occurring amino acid frequency : 3
Least occurring amino acid : K
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.2, 0.3, 0.3)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CS)NC(=O)[C@@H](NC(=O)[C@@H](N)CCCCN)[C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCC(=O)N1CCC[C@H]1C(=O)N[C@@H](CS)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CS)C(=O)O)[C@@H](C)O)[C@@H](C)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | THHTTTTTCTTCCCETTTTT |
| Chou-Fasman (CF) | CCHHHHHEECCCCEECCCCC |
| Neural Network (NN) | CCCCCCCCCCCCCCCCCCCC |
| Joint/Consensus | CCCCCCCCCCCCCCCCCCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
Reference
1 : Wong JH and Ng TB. Lunatusin, a trypsin-stable antimicrobial peptide from lima beans (Phaseolus lunatus L.). Peptides. 2005; 26:2086-92. doi: 10.1016/j.peptides.2005.03.004
Literature
Paper title : Lunatusin, a trypsin-stable antimicrobial peptide from lima beans (Phaseolus lunatus L.).
Doi : https://doi.org/10.1016/j.peptides.2005.03.004
Abstract : An anti-fungal peptide designated as lunatusin, with a molecular mass around 7kDa, was purified from the seeds of Chinese lima bean (Phaseolus lunatus L.). The peptide was isolated using a simple protocol consisting of affinity chromatography on Affi-gel blue gel and gel filtration on Superdex 75. Lunatusin exerted an anti-fungal activity toward fungal species such as Fusarium oxysporum, Mycosphaerella arachidicola and Botrytis cinerea, and an antibacterial action on, Bacillus megaterium, Bacillus subtilis, Proteus vulgaris and Mycobacterium phlei. It also inhibited proliferation in the breast cancer cell line MCF-7. Lunatusin reduced the activity of HIV-1 reverse transcriptase and it also inhibited translation in a cell-free rabbit reticulocyte lysate system. Its anti-fungal activity was retained after incubation with trypsin. Lunatusin elicited a mitogenic response from mouse splenocytes.