dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp04316

General Description

Peptide name : Lunasin

Source/Organism : Lima bean

Linear/Cyclic : Not found

Chirality : L

Sequence Information

Sequence : KTCENLADTFRGPCFATSNC

Peptide length: 20

C-terminal modification: Not found

N-terminal modification : Free

Non-natural peptide information: None

Activity Information

Assay type : Not specified

Assay time : Not found

Activity : Not found

Cell line : Not found

Cancer type : Colorectal cancer

Other activity : Anti-fungal activity

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 2178.4251 Dalton

Aliphatic index : 0.295

Instability index : -5.545

Hydrophobicity (GRAVY) : -0.34

Isoelectric point : 6.0489

Charge (pH 7) : -0.2667

Aromaticity : 0.1

Molar extinction coefficient (cysteine, cystine): (0, 125)

Hydrophobic/hydrophilic ratio : 1

hydrophobic moment : -1.147

Missing amino acid : W,H,Q,M,I,Y,V

Most occurring amino acid : T

Most occurring amino acid frequency : 3

Least occurring amino acid : K

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (0.2, 0.3, 0.3)

SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CS)NC(=O)[C@@H](NC(=O)[C@@H](N)CCCCN)[C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCC(=O)N1CCC[C@H]1C(=O)N[C@@H](CS)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CS)C(=O)O)[C@@H](C)O)[C@@H](C)O

Secondary Structure :

Method Prediction
GOR THHTTTTTCTTCCCETTTTT
Chou-Fasman (CF) CCHHHHHEECCCCEECCCCC
Neural Network (NN) CCCCCCCCCCCCCCCCCCCC
Joint/Consensus CCCCCCCCCCCCCCCCCCCC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 16269344

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Click Here

CancerPPD2 ID : Not available

Reference

1 : Wong JH and Ng TB. Lunatusin, a trypsin-stable antimicrobial peptide from lima beans (Phaseolus lunatus L.). Peptides. 2005; 26:2086-92. doi: 10.1016/j.peptides.2005.03.004

Literature

Paper title : Lunatusin, a trypsin-stable antimicrobial peptide from lima beans (Phaseolus lunatus L.).

Doi : https://doi.org/10.1016/j.peptides.2005.03.004

Abstract : An anti-fungal peptide designated as lunatusin, with a molecular mass around 7kDa, was purified from the seeds of Chinese lima bean (Phaseolus lunatus L.). The peptide was isolated using a simple protocol consisting of affinity chromatography on Affi-gel blue gel and gel filtration on Superdex 75. Lunatusin exerted an anti-fungal activity toward fungal species such as Fusarium oxysporum, Mycosphaerella arachidicola and Botrytis cinerea, and an antibacterial action on, Bacillus megaterium, Bacillus subtilis, Proteus vulgaris and Mycobacterium phlei. It also inhibited proliferation in the breast cancer cell line MCF-7. Lunatusin reduced the activity of HIV-1 reverse transcriptase and it also inhibited translation in a cell-free rabbit reticulocyte lysate system. Its anti-fungal activity was retained after incubation with trypsin. Lunatusin elicited a mitogenic response from mouse splenocytes.