dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp04441

General Description

Peptide name : Maculatin 1.2

Source/Organism : Tapping green eyed frog, Australia

Linear/Cyclic : Not found

Chirality : L

Sequence Information

Sequence : GLFVGLAKVAAHNNPAIAEHFQA

Peptide length: 23

C-terminal modification: Not found

N-terminal modification : Free

Non-natural peptide information: None

Activity Information

Assay type : Not specified

Assay time : Not found

Activity : Not found

Cell line : Not found

Cancer type : Not found

Other activity : Anti-bacterial activity

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 2375.6822 Dalton

Aliphatic index : 1.021

Instability index : 8.1217

Hydrophobicity (GRAVY) : 0.4435

Isoelectric point : 6.9209

Charge (pH 7) : -0.0637

Aromaticity : 0.087

Molar extinction coefficient (cysteine, cystine): (0, 0)

Hydrophobic/hydrophilic ratio : 2.28571428

hydrophobic moment : -0.848

Missing amino acid : C,R,W,T,M,S,D,Y

Most occurring amino acid : A

Most occurring amino acid frequency : 6

Least occurring amino acid : K

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (0.4, 0.2, 0.3)

SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CC(C)C)NC(=O)CNC(=O)[C@@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC(C)C)NC(=O)CN)C(C)C)C(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](C)C(=O)O

Secondary Structure :

Method Prediction
GOR TEEHHHHHHHHHTCTHHHHHHHH
Chou-Fasman (CF) EEEEHHHHHHHCCCHHHHHHCCC
Neural Network (NN) HHHHHHHHHHCCCCCCHHHHHHH
Joint/Consensus CEEHHHHHHHHCCCCHHHHHHHH

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 9620615

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID : Not available

Reference

1 : Rozek T, et al. The maculatin peptides from the skin glands of the tree frog Litoria genimaculata: a comparison of the structures and antibacterial activities of maculatin 1.1 and caerin 1.1. J Pept Sci. 1998; 4:111-5. doi: 10.1002/(sici)1099-1387(199804)4:2<111::aid-psc134>3.0.co;2-8

Literature

Paper title : The maculatin peptides from the skin glands of the tree frog Litoria genimaculata: a comparison of the structures and antibacterial activities of maculatin 1.1 and caerin 1.1.

Doi : https://doi.org/10.1002/(sici)1099-1387(199804)4:2<111::aid-psc134>3.0.co;2-8

Abstract : Six peptides have been isolated and characterized from the dorsal glands of the tree frog Litoria genimaculata. One of these is the known hypotensive peptide caerulein; the others have been named maculatins. The amino acid sequences of the maculatin peptides have been determined using a combination of fast atom bombardment mass spectrometry and automated Edman sequencing. Four of the maculatin peptides show antibiotic activity, with maculatin 1.1 [GLFGVLAKVAAHVVPAIAEHF(NH2)] showing the most pronounced activity, particularly against gram-positive organisms. Maculatin 1.1 resembles the known caerin 1 antibiotic peptides, except that four of the central amino acid residues (of the caerin 1 system) are missing in maculatin 1.1. A comparison of the antibiotic activity of maculatin 1.1 with those of caerin 1.1 is reported.