dbacp04606
General Description
Peptide name : Maximin H5
Source/Organism : Yunnan firebelly toad, China, Asia
Linear/Cyclic : Linear
Chirality : D
Sequence Information
Sequence : ILGPVLGLVSDTLDDVLGIL
Peptide length: 20
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information: None
Activity Information
Assay type : Not specified
Assay time : 30min
Activity : MIC : 80 μM
Cell line : Not found
Cancer type : Not found
Other activity : Anti- microbial activity
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 2022.3816 Dalton
Aliphatic index : 1.995
Instability index : 26.63
Hydrophobicity (GRAVY) : 1.48
Isoelectric point : 4.05
Charge (pH 7) : -3.2365
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 3
hydrophobic moment : 0.4148
Missing amino acid : C,R,W,H,Q,M,E,K,F,Y,N,A
Most occurring amino acid : L
Most occurring amino acid frequency : 6
Least occurring amino acid : P
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.3, 0.4, 0.6)
SMILES Notation: CC[C@H](C)[C@H](N)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)O)[C@@H](C)CC)C(C)C)[C@@H](C)O)C(C)C)C(C)C
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EECCEEEEEEECCECEEEEE |
| Chou-Fasman (CF) | EEEEEEEEEEHHHHEEECCC |
| Neural Network (NN) | CCCCCCEECCCCCCHHHHHH |
| Joint/Consensus | EECCEEEEEECCCCCEECCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID : Not available
Reference
1 : Lai R, et al. An anionic antimicrobial peptide from toad Bombina maxima. Biochem Biophys Res Commun. 2002; 295:796-9. doi: 10.1016/s0006-291x(02)00762-3
Literature
Paper title : An anionic antimicrobial peptide from toad Bombina maxima.
Doi : https://doi.org/10.1016/s0006-291x(02)00762-3
Abstract : Amphibian skin is a rich resource of antimicrobial peptides like maximins and maximins H from toad Bombina maxima. A novel cDNA clone encoding a precursor protein that comprises maximin 3 and a novel peptide, named maximin H5, was isolated from a skin cDNA library of B. maxima. The predicted primary structure of maximin H5 is ILGPVLGLVSDTLDDVLGIL-NH2. Containing three aspartate residues and no basic amino acid residues, maximin H5 is characterized by an anionic property. Different from cationic maximin H peptides, only Gram-positive strain Staphylococcus aureus was sensitive to maximin H5, while the other bacterial and fungal strains tested were resistant to it. The presence of metal ions, like Zn2+ and Mg2+, did not increase its antimicrobial potency. Maximin H5 represents the first example of potential anionic antimicrobial peptides from amphibians. The results provide the first evidence that, together with cationic antimicrobial peptides, anionic antimicrobial peptides may also exist naturally as part of the innate defense system.