dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp04904

General Description

Peptide name : Nonribisomal peptide synthase notE

Source/Organism : Mold (strain MF297-2)

Linear/Cyclic : Cyclic

Chirality : Not found

Sequence Information

Sequence : MDSIKLTESHQGLSVLHAKQATETMRETLSSSSSPLSLSSITSPLSSASEPPALGEIQARVSESTLFSNAQVPEFWETCVHEVIQQRCREAPESSAVAAWDGSFTYSELDELSNRLASSLILLGVKAETFVPICMEKSRWATVAILGVMKAGGAFTLLDPSYPLPRLKTICEELSSLVVLSSTTQSERCTQLANVIVVEHLCRAWHPGAYLAQSPATVCPSNVLYVAFTSGSTGKPKGVLIEHRAYSTGAREHLRVFQIDQTSRVLQFSSYAFDVNIMETLSTLMAGGCLCVVGEAQRSDVSLFAEAVDELQVSHAMLTPSFARTVPWENVRHLRVLILGGEEMRESDAAICAERGVRLINAYGAAECSVNATARPGVQPGDNLSTIGHGTGAIAWIIDPDDPERQMGPGTAGELLLEGPIVGRGYLNSPDMTDRVFIDPPTWLRQLRMMDYQHQLYRTGDLAVQDSTGALTLLGRKEGQVKIRGQRVEVAEIEQHIDQVLTAATEVVVEKVTPECDQRDVLMAFVQTGRAAQGWTEGSPFFLPPRPASIQEFSAAQSQLREQLPSYMIPAIFIGVSCIPRTPSGKADRRLLRMTAARLSREELQAFAGSPVHSRPPTTATEHALQQLYADVLELPIMRISMEDSFVRLGGDSIMAVRLVGAARQAGLVLDIRDVLGTARLEEQARKATPVSEETPCEAYVPFSMLGSRCTDRDEVLRVAAEQCGTSPSEIEDIFPCTPLQEGMLALSSSQPQMYVGQIVFGMPEDVDVSQFKAAWQSTADATPILRTRIIHTPQGLLQVVLRGKLAWENYNEHPEACAADVGSQIGSPGAPLIRFALGDGDHRGEFTLTVHHAVWDAWTMRLIHDALERSFQGEMTKKHPFHPFIQYLQQVDGATMDDFWRTELADLEAPSFPALPSTQHRPSPTAMLRHTVEKIEVVPRIHTMASYIHLAWSLLVAHYTDSTEAVYGAIVSGRNSPVAAINELAGPTIATVPVRVRVSPEDTVSAALEQIQTCMVRMVPHEQAGLLRIAKASPDAARACSFQSHLNIQVVEQEHRLLPARRGIASTGMELTRFSSYALNLMLQLSPDNTSVTVDIAYDPQVLSAWEVDRMIHQWEHILRQICREPSGSLQELDFASPQDRDLLRLRNSETPTVDWRCLHDLVLAQEARQPSREAVSAWDGDFTYRELAELSSNFARLLNLFAVGRGSFVPICMDKSRWAIVSILAVLQAGATCVLLDPQHPRQRMQDTIAGLSVPVLVNAPSTAPVTKGLCAIELCVSAKLTEQLWTNAYGSRFQTHVDPDDLAFLIFTSGSTGVPKGIAMPHCTVSSSIYHNSAPMMFDADTRALHFSSYAFDVSIYEIFTTLASGGCVCVPSEFQRTNELADFIQQRAVNWTFLTPSTAQSLHPSEVPGVATLVLGGEAVTPDHVKTWAPGRSLINGYGPAEATICAVGPMPEHGWDPGNIGHVVGGVGWVTIPSDPSRLAAIGAIGELLLEGPFLARGYLNQHEATAASFISPPPWHRTLLPDCDAETTRLYRTGDLVQYEEDGSIRYIGRRDTQLKLRGQRIDLGEIETQLRRSFPGVHDVVAEAIQLPILQDRAALVAFIGCQEAQVTESAVGEQVLSAVDESFQHTVSLAQTRLQAILPPYMLPSVFFPLAHCPKTLTGKTDRRYLRQAVLALPPHELQRYRVAGRQKARIPVSRGPELRLQSIWADLLRIPCDDIGSDDTFLLHGGDSVAAMRMVALARRADFTFRVTDVLSNCTLSELARCTGEEPCLTDGDGTLPTTHEFESGHKMVDSPVSADYHTGMIGTELEMENDAIAVYPTTQAQSFLIKRYPWTHWRFSFHGEVSVERLRTACARLVAAHSIMRTLFVAGAGGERVRHVVMKELDIPLHTGTTHKNLVDYCQSICDAEQEMDVLEAVLPTRLTLISDALQTSHIFILRLSHAQYDGICVPKIFADLEALYNGTEPIAPTRFERYLDERRWYSGERARAFWKEYLAGSSPPCTMPVKATPPTDSDDSRPSAARSVISASQTVRCTAIPFQVTLATVVKAAACLVLARLTGRTDITVGQTVNGRSLPQPWVSEVVGPCVNYIPFRATLSESMSIQDYLVHMQSQHNRCIHYDGAELDTIIKNCTTWDPSTEFGFILQHQNIDMDLSLTLDGNRCASCASSGRLRPSNEVWICSTPSPSGVDLDVVASSQTLTADAAKNLVDDIADMIQTLLYNLETPLRDVVEFD

Peptide length: 2240

C-terminal modification: Cyclic

N-terminal modification : Not found

Non-natural peptide information: None

Activity Information

Assay type : Not specified

Assay time : Not found

Activity : Not found

Cell line : Not found

Cancer type : Not found

Other activity : Not found

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 245920.922 Dalton

Aliphatic index : 0.895

Instability index : 47.4476

Hydrophobicity (GRAVY) : -0.090

Isoelectric point : 5.3682

Charge (pH 7) : -66.9736

Aromaticity : 0.067

Molar extinction coefficient (cysteine, cystine): (251530, 254655)

Hydrophobic/hydrophilic ratio : 1.14765100

hydrophobic moment : 0.0026

Missing amino acid : None

Most occurring amino acid : L

Most occurring amino acid frequency : 220

Least occurring amino acid : W

Least occurring amino acid frequency : 33

Structural Information

3D structure : Not Available

Secondary structure fraction (Helix, Turn, Sheet): (0.3, 0.2, 0.3)

SMILES Notation: 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Secondary Structure :

Method Prediction
GOR HHHHHHHHHHTTEEEHHHHHHHHHHHEEETTTCCCEEEEEEECCECTTCCCCTHHHHHHHHTTEEEEETTCCCHHHHHHHHHHHHHHHHTCTTHHHHHEETTTCCECTHHHHHHHHHHHEEEEHHHCHHECHHHHHHHHHHHHHHHHHHHTTCCEEEECTTCCCCTTEEEHHHHTHEEEEEEECCTHHHHHHHHEEEEHHHHHTTCTTCEECCCCCEECCTTEEEEEEETTCCCCCTTEEEHHHHHTTTHHHHHEEEEEHCCCEEEEEECCEEHHHHHHHHHEEETTTEEEEETHHHHTHHHHHHHHHHHHHHHHHEECCCEEEECTTTHHHHHEEEETTCHHHHHHHHHHHHHTTHEEEEHTTHHHHHHHTCCCCTCCCCCTEEEEEECCCEEEEEECCCCCTTETCCCCCCCEEETCCEEEEEECTCCCCCEEEECCCCCHHHHHHHHHHTTTTEEEECEEEECCTTCEEEHHHHTTHEHHHTHHHHHHHHHHHHHHHHHHHHHEEEETCCCTHHHHHHHHEEHHHCHHTTTCCTTCCCCCCCCCTCHHHHHHHHHHHHTTCTTTCCEEEEEEEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCCEECCCTCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHETTTCCHEEEEHHHHHHHTTEEEEEEEHHTCHHHHHHHHHTCCCTTTCTTHTCCCEEETTTTTCCTTHHHHHHHHTTCCCTCCEEEECCCCCTTTHEEEETTTCCCEEEEEEEECCCCCHHHHHHHHHHHHCTTCCHHEEEEEEECCCCCEEEEEETTHHHTTTTTCHHHHHHHTTCEECCCCCCEEEEEETTTTCTTHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTTCTCCCHHHEEEECTTCCEHHHHHHHHHHHHCTCCCCCTTCCCCTCTTHHHHHHHHHHHHEHHHHHEEEHHHHHHHHHHEEETTTCHEEEEEEEECCCCCEEEHHHTTCCCEEEEEEEEEECCTCHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCHHHHHHHHTTCCHHHHHHHHHHHCHHHHTEECTTCHHEEHHHHTHHHEEEECCTCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHECCTTTCCEEEHHCCCCCTHHEEETTTTCCCEEHHHHTHHHHHHHHHCTHHHHEEECTTTHHHHHHHHHHHHHHHHHHHHEECCTCECEEEHHTHHHHHEEEHHHHHTTCEEEEECTCCCHHHEEECEETEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHEEEEHHTTEEEEECCCCTTHHEEEEETTCCCCCCEEEEEEEEETTEEECTTCCHHHHHHHHHHHETTCETTTHEEEEEEEETTTCEEECCTTHHHHHHHHHHHHHHHTTEEEECCCCTETCCCTTCCTEEEEEETCCEECCTCEEECCTTTEEEETCCCCTHEEEETCCCCCTTCCTTCEEEEEEEEEEEECCCCCCHHHEHHHHHHHHHTCCHHHHTHTTHHHHHHEEEECCCCCCETTCCTTTTTHHEEEETTCCEEETTTTCEEEEECCHHHHHHTTCEEETTHHHHHHHTTCTTCEEEHHHHHHCHHHHHHHHHEEEHHHHHHHHHHHHHHHHEEHHHHHHHEEEEHHHHHEEEECCCCCCCCCEECCTTTCTTCCTTCCCHHHHHHHEETCCCTHHHHHHHHHHHHEECEECTCCCHEHHHHHHHHTECCCCCTTCCCEEEEETCCHHHHHHHHHHHHHHHHEEEEEETTTTTCCTTHHTTTTTCTTEETTTTCCCCCHHHHTTHEEECCTTTTTTEEEECCCHHHHHHHHHHECCCCCCHEEEEETCTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHEEEEHTTTTHHHHHHHHHHHHCHHEETCCCETCEETTETCHHHHHHHHHHHHHCHHEEEEEEHHHHHEEEEEEEHTTTTCTTCECCCCHHHHHHHTTTCCCCCCHHHHTHHTHHHHTTTHHHHHHHHHEETTTCCTCCCCETCCCCCCCCTCCCTHEEEEEEETEEEEEEECCCEEEEEHEHHHHHHHHHHHETEEEEEEEEEEEECCCCCCCCEEEEECCCECCCCEEHHHTTHHHHHHHHEEEHTTTTTEEECTTCCHHHEEEECCCCCTTCHHHEHHHHTCCCHHHEEECTTCTEEETTTTTCECTTTEEEEEECCCCCCEEEEEEETTHEEHHHHHHHHHHHHHHHHHHEETTTTCCCHHHEEEH
Chou-Fasman (CF) CCEEHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEECCCCHHHHHHEECCCEEEHHHHHHHCCCHHHHHCCEEEEHHHHHHCCHHHHEEEEEEHHHHEEEEEHHHHCCEECEEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHEEEEEEEEEEHHHHEECCCEEEEEHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEEECCCCCEEEHHHHCEECCHHHHEEEEECCCEEEEEEEECCCCEEEHHHHEEECCCCCEEEEEHHHHCEEEEHHHHHHHHHEEHHHHEEECCCEEEECCCEECEEEEEEHHHHHHHHHHHHHHHHEEEECCCHHHHHEEEECCCCEEEECCCCEEEEECCCCCCEEEECCCHHHHHCCCCCHHHHHHCCEEEECEEECCCCCCEEEEECCCEEHHHHHHHHHCCEEEECCHHHHCCCCEECEEHHHHHHEEEEECCCCHHHHHHHHHCCEEHHHHEEECCCEECHHHHEEHHHHEEEECHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEECEEEEEEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHCCCCHHHHHEEEEEHHHHEEEECCCEECCCCEEEHHHHHHEEEECCEEEEECHHHHHHHHHCEECCCCCCCCCEEECCCCCCEEECHHHHCHHHHHHEECCCCHHHHEEECEEHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEHHHHHHEECCCCEEEEEEEEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHEEEEHHHHHHHEEHHHHHHHCCCCEEEEEEEEECCHHHHHHCHHHHHHHHHCCCCCCCCEECCCCCHHHHEEHHHHHEEEECEECCCEEEHHHHEECCEEEEEHHHHEEEEEEECCCCCCCHHHHHCCEEEEEEEEEEEECCCCEEHHHHHHEEEEECEEEHHHHHHHCHHHHCCCHHHHHHEECCCEEEEEEHHHHHHHHCCEEEECCHHHHEEEECCHHHHHHHCCCCCEEEEEEEECCCEEEHHHHHHHHHCHHHHEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHHCHHHHHHHCCCHHHHCCCCCEEEEHHHHHHCCHHHHHHHHEEEECCEEEEECCCCCCEEEEEEEHHHHHHEEEEECCCCCCCHHHHEEEECEEEEEECCCCCCEEEEEHHHHHHHEEHHHHHHHEEEECCCCEEEEECCCCHHHHEEEEEEEEECCCHHHHCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHHEEECCCEEEEEEEECEECCCCCCCCCCEEEEEEHHHHEECCCEECCCCCCEEEECCCHHHHEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHEEHHHHHHCCCCCCCEEEHHHHHHHHEEECCCCCEEEECCCHHHHEEEEEECEECEECCCCEEEEEEECCCHHHHHHCCCCCHHHHCCCCCCCCCCEEEEHHHHHEEEEHHHHHHHEEEEEHHHHEEECCCHHHHEEEHHHHHHEEEEECCCEEHHHHCCCEECEEEEEHHHHCCCEEEECCCCEEEHHHHHHCCCCCCEEEEEECCCCCCEEEECCCHHHHEEEHHHHEEECCCCEECCCEECCCCCCHHHHHHHHHHHHHHHEEEEEEEEECEEEHHHHHHCCHHHHEEECCCCCEEEHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHEEEEEEECCCEEECCCEEEEECEEECCCCEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEHHHHEEECEEEEECCCEEEEEEEEHHHHHHHHHHHHHEEEEEEEEHHHHEEEEEEEEHHHHHHCEEEEEEEHHHHHHHHEECCCCCCCCHHHHHHHHHEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECEEEEECEEEEEEEEEEEEEHHHHEEHHHHEEECEEEEEEEEEECCCCCCEEEEEEEEECEEEEECCCCHHHHEEEECEEHHHHHCCCEEEECCHHHHEEEEECEEECCCCCCCEEEECCCCHHHHHEECCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEECCEEEECEEEEHHHHHHHCCCHHHHHEEEEEEHHHHCCEECCCCCC
Neural Network (NN) CCCHHCCHCCCCHHHHHHHHCHHHHHEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCCHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHEHCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEECECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCEEECCCCCCHHHHCHHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHCCCECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHECCCCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHCCHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHEEEEEECCCCCCHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHCCCCCCCHHEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCHHHHHEEEEHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCCCCCCHEHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHCCC
Joint/Consensus CCCHHHHHCCCCEEHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHCHHHHHHHHHCCCCCHHHHEECCCCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHCCEEEEEEECCCHHHHHHHHEEEHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHEEEECCCHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCEECCCCCCEEEEHHHHHHHCCEECCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHCCCCCCCHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEHHHHHCEEHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEHHHHHCCCEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEECCCHHHHHHCCCCCCCCHHHHHCCCCCCCCEEHHHHHHHCHHHHHHHHHEEEHHHHHCCCCCCHHHHHEEHHHHHHHEEEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Not available.

ADMET Properties: Not available.

Cross Referencing databases

Pubmed Id : 20722388 17304611 22188465 23213353

Uniprot : Click here

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID : Not available

Reference

1 : Li S, et al. Comparative analysis of the biosynthetic systems for fungal bicyclo[2.2.2]diazaoctane indole alkaloids: the (+)/(-)-notoamide, paraherquamide and malbrancheamide pathways. Medchemcomm. 2012; 3:987-996. doi: 10.1039/C2MD20029E

2 : Ding Y, et al. Genome-based characterization of two prenylation steps in the assembly of the stephacidin and notoamide anticancer agents in a marine-derived Aspergillus sp. J Am Chem Soc. 2010; 132:12733-40. doi: 10.1021/ja1049302

3 : Kato H, et al. Notoamides A-D: prenylated indole alkaloids isolated from a marine-derived fungus, Aspergillus sp. Angew Chem Int Ed Engl. 2007; 46:2254-6. doi: 10.1002/anie.200604381

4 : Li S, et al. Biochemical characterization of NotB as an FAD-dependent oxidase in the biosynthesis of notoamide indole alkaloids. J Am Chem Soc. 2012; 134:788-91. doi: 10.1021/ja2093212

Literature

Paper title : Comparative analysis of the biosynthetic systems for fungal bicyclo[2.2.2]diazaoctane indole alkaloids: the (+)/(-)-notoamide, paraherquamide and malbrancheamide pathways.

Doi : https://doi.org/10.1039/C2MD20029E

Abstract : The biosynthesis of fungal bicyclo[2.2.2]diazaoctane indole alkaloids with a wide spectrum of biological activities have attracted increasing interest. Their intriguing mode of assembly has long been proposed to feature a non-ribosomal peptide synthetase, a presumed intramolecular Diels-Alderase, a variant number of prenyltransferases, and a series of oxidases responsible for the diverse tailoring modifications of their cyclodipeptide-based structural core. Until recently, the details of these biosynthetic pathways have remained largely unknown due to lack of information on the fungal derived biosynthetic gene clusters. Herein, we report a comparative analysis of four natural product metabolic systems of a select group of bicyclo[2.2.2]diazaoctane indole alkaloids including (+)/(-)-notoamide, paraherquamide and malbrancheamide, in which we propose an enzyme for each step in the biosynthetic pathway based on deep annotation and on-going biochemical studies.

Paper title : Genome-based characterization of two prenylation steps in the assembly of the stephacidin and notoamide anticancer agents in a marine-derived Aspergillus sp.

Doi : https://doi.org/10.1021/ja1049302

Abstract : Stephacidin and notoamide natural products belong to a group of prenylated indole alkaloids containing a core bicyclo[2.2.2]diazaoctane ring system. These bioactive fungal secondary metabolites have a range of unusual structural and stereochemical features but their biosynthesis has remained uncharacterized. Herein, we report the first biosynthetic gene cluster for this class of fungal alkaloids based on whole genome sequencing of a marine-derived Aspergillus sp. Two central pathway enzymes catalyzing both normal and reverse prenyltransfer reactions were characterized in detail. Our results establish the early steps for creation of the prenylated indole alkaloid structure and suggest a scheme for the biosynthesis of stephacidin and notoamide metabolites. The work provides the first genetic and biochemical insights for understanding the structural diversity of this important family of fungal alkaloids.

Paper title : Notoamides A-D: prenylated indole alkaloids isolated from a marine-derived fungus, Aspergillus sp.

Doi : https://doi.org/10.1002/anie.200604381

Abstract : Not available

Paper title : Biochemical characterization of NotB as an FAD-dependent oxidase in the biosynthesis of notoamide indole alkaloids.

Doi : https://doi.org/10.1021/ja2093212

Abstract : Notoamides produced by Aspergillus spp. bearing the bicyclo[2.2.2]diazaoctane core structure with unusual structural diversity represent a compelling system to understand the biosynthesis of fungal prenylated indole alkaloids. Herein, we report the in vitro characterization of NotB, which catalyzes the indole 2,3-oxidation of notoamide E (13), leading to notoamides C (11) and D (12) through an apparent pinacol-like rearrangement. This unique enzymatic reaction with high substrate specificity, together with the information derived from precursor incorporation experiments using [(13)C](2)-[(15)N](2) quadruply labeled notoamide S (10), demonstrates 10 as a pivotal branching point in notoamide biosynthesis.