dbacp05308
General Description
Peptide name : Peptide 5
Source/Organism : Synthetic peptide of four designed analogs of vasoactive intestinal peptide, bombesin
Linear/Cyclic : Linear
Chirality : Mix
Sequence Information
Sequence : fCYwO-CyLeu-Pen-TKKrPKPfQwFwL-CyLeu-KKLMYPTYLKKfQWAV-Aib-HL
Peptide length: Not available
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information: Aib : 1-amino-isobutyric acid, O: Ornithine, Pen:penicillamine, CyLeu:cycloleucine or 1-aminocyclopentane-1-carboxylic acid and disulfide bond between Cys and Pen
Activity Information
Assay type : MTT/MTS assay
Assay time : 24h
Activity : 18.2 % inhibition of cell proliferation at 10 nM
Cell line : KB
Cancer type : Oral cancer
Other activity : Not found
Physicochemical Properties
Amino Acid Composition Bar Chart : Not available
Molecular mass : Not available
Aliphatic index : Not available
Instability index : Not available
Hydrophobicity (GRAVY) : Not available
Isoelectric point : Not available
Charge (pH 7) : Not available
Aromaticity : Not available
Molar extinction coefficient (cysteine, cystine): Not available
Hydrophobic/hydrophilic ratio : Not available
hydrophobic moment : Not available
Missing amino acid : Not available
Most occurring amino acid : Not available
Most occurring amino acid frequency : Not available
Least occurring amino acid : Not available
Least occurring amino acid frequency : Not available
Structural Information
3D-structure: Not available
Secondary structure fraction (Helix, Turn, Sheet): Not available
SMILES Notation: Not available
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | Not available |
| Chou-Fasman (CF) | Not available |
| Neural Network (NN) | Not available |
| Joint/Consensus | Not available |
Molecular Descriptors and ADMET Properties
Molecular descriptors: Not available
ADMET properties: Not available
Cross Referencing Databases databases
Pubmed Id : 17559067, .
Uniprot : Not available
CancerPPD : Click here
ApIAPDB : Click Here
Reference
1 : Prasad S, et al. Delivering multiple anticancer peptides as a single prodrug using lysyl-lysine as a facile linker. J Pept Sci. 2007; 13:458-67. doi: 10.1002/psc.867
Literature
Paper title : Delivering multiple anticancer peptides as a single prodrug using lysyl-lysine as a facile linker.
Doi : https://doi.org/10.1002/psc.867
Abstract : A large 40-residue precursor peptide (propeptide 5) was synthesized by linking together four designed anticancer peptide analogs to the neuropeptides: vasoactive intestinal peptide, somatostatin, bombesin and substance P, using enzyme cleavable lysyl-lysine linkers. On incubation with the enzyme trypsin, propeptide 5 was cleaved in a sequence-specific manner at the lysyl-lysine residues in the linker to release the individual peptide fragments which were identified by LC-MS. Another precursor peptide (propeptide 5a), consisting of two of the peptide analogs linked through lysyl-lysine linker, was also preferentially cleaved at the Lys-Lys site on incubation with the enzyme trypsin. Propeptide 5 showed potent anticancer activity, both in vitro and in vivo, which was greater than that of the individual component peptides. The enhanced activity suggests that the propeptide is possibly cleaved in the biological system at the lysyl-lysine site to yield the individual peptide analogs, which together show a synergistic effect. On the basis of these experimental findings, it can be concluded that pairs of basic amino acids such as Lys-Lys can be used as facile linkers for delivering multiple biologically active peptides.