dbacp05970
General Description
Peptide name : RGSALTHLP
Source/Organism : Siamese crocodile Leukocyte
Linear/Cyclic : Not found
Chirality : Not found
Sequence Information
Sequence : RGSALTHLP
Peptide length: 9
C-terminal modification: Not found
N-terminal modification : Not found
Non-natural peptide information: None
Activity Information
Assay type : Sulforhodamine B colorimetric assay
Assay time : 24h
Activity : IC50 : 168.33 ± 1.6 μM
Cell line : CaSki
Cancer type : Cervical cancer
Other activity : Not found
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 951.0811 Dalton
Aliphatic index : 0.977
Instability index : 20.8556
Hydrophobicity (GRAVY) : -0.2
Isoelectric point : 9.7565
Charge (pH 7) : 0.8473
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1.25
hydrophobic moment : 0.6179
Missing amino acid : C,W,Q,M,I,E,K,F,D,Y,N,V
Most occurring amino acid : L
Most occurring amino acid frequency : 2
Least occurring amino acid : R
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (0.3, 0.3, 0.3)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)CNC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(=O)O)[C@@H](C)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | TTTEEEECC |
| Chou-Fasman (CF) | CCCCCCCCC |
| Neural Network (NN) | CCCCCCCCC |
| Joint/Consensus | CCCCCCCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID : Not available