dbacp06785
General Description
Peptide name : NT-9
Source/Organism : Synthetic analogue of Neurotensin
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : RRPYIL
Peptide length: 6
C-terminal modification: Linear
N-terminal modification : Free
Non-natural peptide information:
Activity Information
Assay type : MTS assay
Assay time : 24-h
Activity : Not Available
Cell line : HCT-116
Cancer type : Colorectal Cancer
Other activity : Anticancer
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 816.9903 Dalton
Aliphatic index : 1.3
Instability index : 168
Hydrophobicity (GRAVY) : -0.6
Isoelectric point : 10.835
Charge (pH 7) : 1.7591
Aromaticity : 16.66
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1
hydrophobic moment : -0.388
Missing amino acid : A,C,D,E,F,G,H,K,M,N,Q,S,T,V,W
Most occurring amino acid : R
Most occurring amino acid frequency : 2
Least occurring amino acid : P
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (16., 16., 50.)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](CC(C)C)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | CCTEEE |
| Chou-Fasman (CF) | CEECCC |
| Neural Network (NN) | CCCEEE |
| Joint/Consensus | CCCEEE |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 7654
Reference
1 : Szaryńska M, et al. Bradykinin and Neurotensin Analogues as Potential Compounds in Colon Cancer Therapy. Int J Mol Sci. 2023; 24:(unknown pages). doi: 10.3390/ijms24119644
Literature
Paper title : Bradykinin and Neurotensin Analogues as Potential Compounds in Colon Cancer Therapy.
Doi : https://doi.org/10.3390/ijms24119644
Abstract : Colorectal cancer (CRC) is one of the most lethal malignancies worldwide, so the attempts to find novel therapeutic approaches are necessary. The aim of our study was to analyze how chemical modifications influence physical, chemical, and biological properties of the two peptides, namely, bradykinin (BK) and neurotensin (NT). For this purpose, we used fourteen modified peptides, and their anti-cancers features were analyzed on the HCT116 CRC cell line. Our results confirmed that the spherical mode of a CRC cell line culture better reflects the natural tumour microenvironment. We observed that the size of the colonospheres was markedly reduced following treatment with some BK and NT analogues. The proportion of CD133+ cancer stem cells (CSCs) in colonospheres decreased following incubation with the aforementioned peptides. In our research, we found two groups of these peptides. The first group influenced all the analyzed cellular features, while the second seemed to include the most promising peptides that lowered the count of CD133+ CSCs with parallel substantial reduction in CRC cells viability. These analogues need further analysis to uncover their overall anti-cancer potential.