dbacp06917
General Description
Peptide name : KM8
Source/Organism : Synthetic derivative of Mastoparan
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : KLLKINLKALAALAKKIL
Peptide length: 18
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information:
Activity Information
Assay type : Not Available
Assay time : Not Available
Activity : Not Available
Cell line : Not Available
Cancer type : Not Available
Other activity : Antimicrobial
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1962.5518 Dalton
Aliphatic index : 1.955
Instability index : -3.4389
Hydrophobicity (GRAVY) : 0.8889
Isoelectric point : 10.602
Charge (pH 7) : 4.7551
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 2
hydrophobic moment : -1.339
Missing amino acid : C,D,E,F,G,H,M,P,Q,R,S,T,V,W,Y
Most occurring amino acid : L
Most occurring amino acid frequency : 6
Least occurring amino acid : N
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (83., 5.5, 44.)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CCCCN)[C@@H](C)CC)C(=O)N[C@@H](CC(C)C)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHHHHHHHHHHHHHHH |
| Chou-Fasman (CF) | HHHHHHHHHHHHHHHCCC |
| Neural Network (NN) | HHHHHHHHHHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHHHHHHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 7592
Reference
1 : Zhang C, et al. Plasma metabolites-based design of long-acting peptides and their anticancer evaluation. Int J Pharm. 2023; 631:122483. doi: 10.1016/j.ijpharm.2022.122483
Literature
Paper title : Plasma metabolites-based design of long-acting peptides and their anticancer evaluation.
Doi : https://doi.org/10.1016/j.ijpharm.2022.122483
Abstract : Antimicrobial peptides (AMPs) are generally small cationic amphipathic peptides, which are thought to be ideal antineoplastic agents, owing to their favorable selectivity to cancer cells and the ability to overcome drug-resistance. In this study, an anticancer AMP (Mastoparan (INLKALAALAKKIL-NH2)) was selected as the lead compound and a series of Mastoparan derivatives were designed. Preliminary studies verified that an analogue of Mastoparan, KM8 (KLLKINLKALAALAKKIL-NH2), exhibited prominent selective antitumor effects. Instead, it presents a significant defect of metabolic instability, with a half-life in plasma of only about 0.5 h. Metabolite profiling of KM8 was performed and indicated the structure <sub>9</sub>AL<sub>10</sub> in peptide sequence could be the fragile site for KM8. Thus, the Aib (unnatural amnio acid) was employed to substitute the <sub>9</sub>Ala residue in KM8, and generating a long-acting KM8 derivative, namely KM8-Aib. Further investigations revealed KM8-Aib possessed higher metabolic stability, more potent anticancer activity in vitro & in vivo, and lower toxicity. Therefore, KM8-Aib is suggested be a potential antimalignant agent that worthy of more in-depth study.