dbacp07304
General Description
Peptide name : vCPP0769
Source/Organism : Capsid protein of the Torque teno douroucouli virus
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : RRLTLRQLLGLGSRRRRRSR
Peptide length: 20
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information:
Activity Information
Assay type : MTT assay
Assay time : 24-h
Activity : IC50 = 21.1 ± 2.0 μM
Cell line : SK-BR-3
Cancer type : Breast Cancer
Other activity : Anticancer and Cell Penetrating
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 2506.9649 Dalton
Aliphatic index : 0.975
Instability index : 213.19
Hydrophobicity (GRAVY) : -1.405
Isoelectric point : 12
Charge (pH 7) : 8.76
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 0.5385
hydrophobic moment : 0.4262
Missing amino acid : A,C,D,E,F,H,I,K,M,N,P,V,W,Y
Most occurring amino acid : R
Most occurring amino acid frequency : 9
Least occurring amino acid : T
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (25, 20, 30)
SMILES Notation: CC(C)C[C@H](NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](N)CCCNC(=N)N)[C@@H](C)O)C(=O)NCC(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHEEEEETTTHHHHHTTT |
| Chou-Fasman (CF) | EEEEHHHHCCCCCCCCCCCC |
| Neural Network (NN) | HHHHHHHHHHCCCCCCCCCC |
| Joint/Consensus | HHHHHHHHCCCCCCCCCCCC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 7204
Reference
1 : Oliveira FD, et al. The antimetastatic breast cancer activity of the viral protein-derived peptide vCPP2319 as revealed by cellular biomechanics. FEBS J. 2022; 289:1603-1624. doi: 10.1111/febs.16247
Literature
Paper title : The antimetastatic breast cancer activity of the viral protein-derived peptide vCPP2319 as revealed by cellular biomechanics.
Doi : https://doi.org/10.1111/febs.16247
Abstract : The incidence of metastatic breast cancer (MBC) is increasing and the therapeutic arsenal available to fight it is insufficient. Brain metastases, in particular, represent a major challenge for chemotherapy as the impermeable nature of the blood-brain barrier (BBB) prevents most drugs from targeting cells in the brain. For their ability to transpose biological membranes and transport a broad spectrum of bioactive cargoes, cell-penetrating peptides (CPPs) have been hailed as ideal candidates to deliver drugs across biological barriers. A more ambitious approach is to have the CPP as a drug itself, capable of both killing cancer cells and interacting with the blood/brain interface, therefore blocking the onset of brain metastases. vCPP2319, a viral protein-derived CPP, has both properties as it: (a) is selective toward human breast cancer cells (MDA-MB-231) and increases cell stiffness compared to breast epithelial cells (MCF 10A) hindering the progression of metastases; and (b) adsorbs at the surface of human brain endothelial cells potentially counteracting metastatic cells from reaching the brain. Overall, the results reveal the selective anticancer activity of the peptide vCPP2319, which is also able to reside at the blood-brain interface, therefore counteracting brain penetration by metastatic cancer cells.