dbacp07345
General Description
Peptide name : HMP-S7
Source/Organism : Human Milk
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : SFIPRAKSTWLNNIKLL
Peptide length: 17
C-terminal modification: Linear
N-terminal modification : Free
Non-natural peptide information:
Activity Information
Assay type : Trypan blue assay
Assay time : 24-h
Activity : IC50 = 89 ± 24 µM
Cell line : Raji
Cancer type : Lymphoma Cancer
Other activity : Anticancer
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 2001.3741 Dalton
Aliphatic index : 1.205
Instability index : 17.5588
Hydrophobicity (GRAVY) : 0.0529
Isoelectric point : 11.166
Charge (pH 7) : 2.4581
Aromaticity : 11.76
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1.125
hydrophobic moment : -1.067
Missing amino acid : C,D,E,G,H,M,Q,V,Y
Most occurring amino acid : L
Most occurring amino acid frequency : 3
Least occurring amino acid : F
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (35., 29., 47.)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)CO)[C@@H](C)CC)[C@@H](C)O)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EECHHTTTCHHTHHHHH |
| Chou-Fasman (CF) | EECCCCEEECCCCCCCC |
| Neural Network (NN) | CCCCCCCCHHHHHHHHH |
| Joint/Consensus | EECCCCCCCCCCHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 6829
Reference
1 : Chiangjong W, et al. HMP-S7 Is a Novel Anti-Leukemic Peptide Discovered from Human Milk. Biomedicines. 2021; 9:(unknown pages). doi: 10.3390/biomedicines9080981
Literature
Paper title : HMP-S7 Is a Novel Anti-Leukemic Peptide Discovered from Human Milk.
Doi : https://doi.org/10.3390/biomedicines9080981
Abstract : Chemotherapy in childhood leukemia is associated with late morbidity in leukemic survivors, while certain patient subsets are relatively resistant to standard chemotherapy. It is therefore important to identify new agents with sensitivity and selectivity towards leukemic cells, while having less systemic toxicity. Peptide-based therapeutics has gained a great deal of attention during the last few years. Here, we used an integrative workflow combining mass spectrometric peptide library construction, in silico anticancer peptide screening, and in vitro leukemic cell studies to discover a novel anti-leukemic peptide having 3+ charges and an alpha helical structure, namely HMP-S7, from human breast milk. HMP-S7 showed cytotoxic activity against four distinct leukemic cell lines in a dose-dependent manner but had no effect on solid malignancies or representative normal cells. HMP-S7 induced leukemic cell death by penetrating the plasma membrane to enter the cytoplasm and cause the leakage of lactate dehydrogenase, thus acting in a membranolytic manner. Importantly, HMP-S7 exhibited anti-leukemic effects against patient-derived leukemic cells ex vivo. In conclusion, HMP-S7 is a selective anti-leukemic peptide with promise, which requires further validation in preclinical and clinical studies.