dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp07433

General Description

Peptide name : [Arg]7-VmCT1

Source/Organism : Synthetic

Linear/Cyclic : Linear

Chirality : L

Sequence Information

Sequence : FLGALWRVAKSVF

Peptide length: 13

C-terminal modification: Linear

N-terminal modification : Amidation

Non-natural peptide information:

Activity Information

Assay type : MTT assay

Assay time : 24-h

Activity : IC50 = 18.0 ± 2.7 μmol/L

Cell line : MCF-7

Cancer type : Breast Cancer

Other activity : Antimicrobial and Anticancer

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 1493.7924 Dalton

Aliphatic index : 1.2

Instability index : 20.9154

Hydrophobicity (GRAVY) : 1.1308

Isoelectric point : 11.000

Charge (pH 7) : 1.7591

Aromaticity : 23.07

Molar extinction coefficient (cysteine, cystine): (0, 0)

Hydrophobic/hydrophilic ratio : 3.3333

hydrophobic moment : 1.5257

Missing amino acid : C,D,E,H,I,M,N,P,Q,T,Y

Most occurring amino acid : F

Most occurring amino acid frequency : 2

Least occurring amino acid : G

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (38., 15., 53.)

SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)Cc1ccccc1)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CO)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)C(C)C)C(C)C

Secondary Structure :

Method Prediction
GOR EHHHHHHHHHHHE
Chou-Fasman (CF) HHHHEECCCCCCC
Neural Network (NN) HHHHHHHHHHHHH
Joint/Consensus HHHHHHHHHHHHC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 33442881.0

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID: 6825

Reference

1 : Pedron CN, et al. Net charge tuning modulates the antiplasmodial and anticancer properties of peptides derived from scorpion venom. J Pept Sci. 2021; 27:e3296. doi: 10.1002/psc.3296

Literature

Paper title : Net charge tuning modulates the antiplasmodial and anticancer properties of peptides derived from scorpion venom.

Doi : https://doi.org/10.1002/psc.3296

Abstract : VmCT1, a linear helical antimicrobial peptide isolated from the venom of the scorpion Vaejovis mexicanus, displays broad spectrum antimicrobial activity against bacteria, fungi, and protozoa. Analogs derived from this peptide containing single Arg-substitutions have been shown to increase antimicrobial and antiparasitic activities against Trypanossoma cruzi. Here, we tested these analogs against malaria, an infectious disease caused by Plasmodium protozoa, and assessed their antitumoral properties. Specifically, we tested VmCT1 synthetic variants [Arg]3 -VmCT1-NH<sub>2</sub> , [Arg]7 -VmCT1-NH<sub>2</sub> , and [Arg]11 -VmCT1-NH<sub>2</sub> , against Plasmodium gallinaceum sporozoites and MCF-7 mammary cancer cells. Our screen identified peptides [Arg]3 -VmCT1-NH<sub>2</sub> and [Arg]7 -VmCT1-NH<sub>2</sub> as potent antiplasmodial agents (IC<sub>50</sub> of 0.57 and 0.51 μmol L-1 , respectively), whereas [Arg]11 -VmCT1-NH<sub>2</sub> did not show activity against P. gallinaceum sporozoites. Interestingly, all peptides presented activity against MCF-7 and displayed lower cytotoxicity toward healthy cells. We demonstrate that increasing the net positive charge of VmCT1, through arginine substitutions, modulates the biological properties of this peptide family yielding novel antiplasmodial and antitumoral molecules.