dbacp07433
General Description
Peptide name : [Arg]7-VmCT1
Source/Organism : Synthetic
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : FLGALWRVAKSVF
Peptide length: 13
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information:
Activity Information
Assay type : MTT assay
Assay time : 24-h
Activity : IC50 = 18.0 ± 2.7 μmol/L
Cell line : MCF-7
Cancer type : Breast Cancer
Other activity : Antimicrobial and Anticancer
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1493.7924 Dalton
Aliphatic index : 1.2
Instability index : 20.9154
Hydrophobicity (GRAVY) : 1.1308
Isoelectric point : 11.000
Charge (pH 7) : 1.7591
Aromaticity : 23.07
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 3.3333
hydrophobic moment : 1.5257
Missing amino acid : C,D,E,H,I,M,N,P,Q,T,Y
Most occurring amino acid : F
Most occurring amino acid frequency : 2
Least occurring amino acid : G
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (38., 15., 53.)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)Cc1ccccc1)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CO)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)C(C)C)C(C)C
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EHHHHHHHHHHHE |
| Chou-Fasman (CF) | HHHHEECCCCCCC |
| Neural Network (NN) | HHHHHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHHHHC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 6825
Reference
1 : Pedron CN, et al. Net charge tuning modulates the antiplasmodial and anticancer properties of peptides derived from scorpion venom. J Pept Sci. 2021; 27:e3296. doi: 10.1002/psc.3296
Literature
Paper title : Net charge tuning modulates the antiplasmodial and anticancer properties of peptides derived from scorpion venom.
Doi : https://doi.org/10.1002/psc.3296
Abstract : VmCT1, a linear helical antimicrobial peptide isolated from the venom of the scorpion Vaejovis mexicanus, displays broad spectrum antimicrobial activity against bacteria, fungi, and protozoa. Analogs derived from this peptide containing single Arg-substitutions have been shown to increase antimicrobial and antiparasitic activities against Trypanossoma cruzi. Here, we tested these analogs against malaria, an infectious disease caused by Plasmodium protozoa, and assessed their antitumoral properties. Specifically, we tested VmCT1 synthetic variants [Arg]3 -VmCT1-NH<sub>2</sub> , [Arg]7 -VmCT1-NH<sub>2</sub> , and [Arg]11 -VmCT1-NH<sub>2</sub> , against Plasmodium gallinaceum sporozoites and MCF-7 mammary cancer cells. Our screen identified peptides [Arg]3 -VmCT1-NH<sub>2</sub> and [Arg]7 -VmCT1-NH<sub>2</sub> as potent antiplasmodial agents (IC<sub>50</sub> of 0.57 and 0.51 μmol L-1 , respectively), whereas [Arg]11 -VmCT1-NH<sub>2</sub> did not show activity against P. gallinaceum sporozoites. Interestingly, all peptides presented activity against MCF-7 and displayed lower cytotoxicity toward healthy cells. We demonstrate that increasing the net positive charge of VmCT1, through arginine substitutions, modulates the biological properties of this peptide family yielding novel antiplasmodial and antitumoral molecules.