dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp07466

General Description

Peptide name : Tachyplesin

Source/Organism : Horseshoe crab

Linear/Cyclic : Linear

Chirality : L

Sequence Information

Sequence : KWCFRVCYRGICYIRRCR

Peptide length: 18

C-terminal modification: Linear

N-terminal modification : Amidation

Non-natural peptide information:

Activity Information

Assay type : MTT assay

Assay time : 24-h

Activity : IC50 = 35 µg/ml

Cell line : A-549

Cancer type : Lung Cancer

Other activity : Antibacterial

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 2381.9153 Dalton

Aliphatic index : 0.594

Instability index : 22.4389

Hydrophobicity (GRAVY) : -0.238

Isoelectric point : 9.931

Charge (pH 7) : 5.7175

Aromaticity : 22.22

Molar extinction coefficient (cysteine, cystine): (4, 2)

Hydrophobic/hydrophilic ratio : 1.25

hydrophobic moment : -1.174

Missing amino acid : A,D,E,H,L,M,N,P,Q,S,T

Most occurring amino acid : R

Most occurring amino acid frequency : 5

Least occurring amino acid : K

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (5.5, 5.5, 38.)

SMILES Notation: CC[C@H](C)[C@H](NC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](CS)NC(=O)[C@@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CS)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@@H](N)CCCCN)C(C)C)C(=O)N[C@@H](CS)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@H](C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CS)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O)[C@@H](C)CC

Secondary Structure :

Method Prediction
GOR THHEETTTTTCEEEETTT
Chou-Fasman (CF) CEEEEEEEEEEEEECCCC
Neural Network (NN) CCCEEEECCCEEEEEECC
Joint/Consensus CCCEEEECCCEEEEECCC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id : 33245189.0

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID: 6786

Reference

1 : Wu J, et al. Tachyplesin induces apoptosis in non-small cell lung cancer cells and enhances the chemosensitivity of A549/DDP cells to cisplatin by activating Fas and necroptosis pathway. Chem Biol Drug Des. 2021; 97:809-820. doi: 10.1111/cbdd.13810

Literature

Paper title : Tachyplesin induces apoptosis in non-small cell lung cancer cells and enhances the chemosensitivity of A549/DDP cells to cisplatin by activating Fas and necroptosis pathway.

Doi : https://doi.org/10.1111/cbdd.13810

Abstract : Cisplatin has strong broad-spectrum anticancer activity and is one of the most effective anticancer drugs currently used. The clinical application of cisplatin has led to the resistance of cancer cells to cisplatin. Tachyplesin is an active, natural marine peptide with antitumour activity. In the present study, we investigated whether tachyplesin can be used in non-small cell lung cancer (NSCLC) A549 and H460 cells as well as the cisplatin-resistant human A549/DDP NSCLC cell line. The results revealed that tachyplesin treatment significantly inhibited proliferation and induced apoptosis in A549 and H460 cells and the combination of tachyplesin and cisplatin significantly suppressed migration and improved sensitivity to cisplatin in A549/DDP cells. Further mechanistic examination revealed that tachyplesin induced apoptosis in A549/DDP cells by increasing Fas, FasL and p-RIPK1 levels. These results indicated that tachyplesin induces lung cancer death by activating the Fas, mitochondrial and necroptosis pathways. Tachyplesin could be developed as a candidate drug for cisplatin-resistant NSCLC.