dbacp07479
General Description
Peptide name : (LLKK)4 linear peptide
Source/Organism : Synthetic
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : LLKKLLKKLLKKLLKK
Peptide length: 16
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information:
Activity Information
Assay type : MTT assay
Assay time : 48-h
Activity : Cell Viability (%) ~ 15.07 ± 0.5 at 30 µg/mL
Cell line : Bcap-37
Cancer type : Breast Cancer
Other activity : Antimicrobial
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1948.6545 Dalton
Aliphatic index : 1.95
Instability index : -27.768
Hydrophobicity (GRAVY) : -0.05
Isoelectric point : 10.845
Charge (pH 7) : 7.7521
Aromaticity : 0
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1
hydrophobic moment : -0.880
Missing amino acid : A,C,D,E,F,G,H,I,M,N,P,Q,R,S,T,V,W,Y
Most occurring amino acid : L
Most occurring amino acid frequency : 8
Least occurring amino acid : L
Least occurring amino acid frequency : 8
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (100, 0, 50)
SMILES Notation: CC(C)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CC(C)C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHHHHHHHHHHHHH |
| Chou-Fasman (CF) | HHHHHHHHHHHHHCCC |
| Neural Network (NN) | HHHHHHHHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHHHHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 6648
Reference
1 : Wang X, et al. Branched α-helical peptides enhanced antitumor efficacy and selectivity. Biomater Sci. 2020; 8:6387-6394. doi: 10.1039/d0bm00629g
Literature
Paper title : Branched α-helical peptides enhanced antitumor efficacy and selectivity.
Doi : https://doi.org/10.1039/d0bm00629g
Abstract : Drug resistance to traditional chemotherapeutics is one of the main challenges in cancer treatment. Herein, cationic antimicrobial peptides (CAPs) were repurposed as anticancer agents to counter chemotherapy drug resistance. After a systematic study of de novo designed synthetic α-helical CAPs in various cell lines, the 4-arm branched peptide {[(LLKK)2]2κC}2 was found to exhibit better selectivity compared to its linear counterpart (LLKK)4, and was more effective than the 2-arm branched peptide [(LLKK)2]2κC. In particular, the 4-arm branched peptide could counter drug resistance and kill multiple drug resistant cells. Mechanism studies reveal that these α-helical peptides killed both the parent and resistant cancer cells based on the apoptotic pathway. The in vivo study in mice bearing breast tumors showed that branched peptides could be retained at the tumour sites after intratumoral injection and significantly reduced tumor growth while exhibiting minimal toxicity on main organs. These results indicate that the 4-arm branched peptide is a promising candidate for anticancer therapy.