dbacp07493
General Description
Peptide name : Figainin 1
Source/Organism : Boana raniceps
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : FIGTLIPLALGALTKLFK
Peptide length: 18
C-terminal modification: Linear
N-terminal modification : Amidation
Non-natural peptide information:
Activity Information
Assay type : MTT assay
Assay time :
Activity : IC50 = 10.5 µM
Cell line : B16-F10
Cancer type : Skin Cancer
Other activity : Antimicrobial and Anticancer
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1916.3921 Dalton
Aliphatic index : 1.627
Instability index : -14.655
Hydrophobicity (GRAVY) : 1.4222
Isoelectric point : 10.002
Charge (pH 7) : 1.7581
Aromaticity : 11.11
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 3.5
hydrophobic moment : -0.021
Missing amino acid : C,D,E,H,M,N,Q,R,S,V,W,Y
Most occurring amino acid : L
Most occurring amino acid frequency : 5
Least occurring amino acid : P
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (50, 16., 61.)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@@H](N)Cc1ccccc1)C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCCCN)C(=O)O)[C@@H](C)O)[C@@H](C)CC)[C@@H](C)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | EEECECHHHHHHHHHHHH |
| Chou-Fasman (CF) | EEEEEHHHHHCCCCCCCC |
| Neural Network (NN) | CCCCCCHHHHHHHHHHHH |
| Joint/Consensus | EEEEECHHHHHHHHHHHH |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 6554
Reference
1 : Santana CJC, et al. Figainin 1, a Novel Amphibian Skin Peptide with Antimicrobial and Antiproliferative Properties. Antibiotics (Basel). 2020; 9:(unknown pages). doi: 10.3390/antibiotics9090625
Literature
Paper title : Figainin 1, a Novel Amphibian Skin Peptide with Antimicrobial and Antiproliferative Properties.
Doi : https://doi.org/10.3390/antibiotics9090625
Abstract : Amphibian skin secretions are abundant in bioactive compounds, especially antimicrobial peptides. These molecules are generally cationic and rich in hydrophobic amino acids, have an amphipathic structure and adopt an α-helical conformation when in contact with microorganisms membranes. In this work, we purified and characterized Figainin 1, a novel antimicrobial and antiproliferative peptide from the cutaneous secretion of the frog Boana raniceps. Figainin 1 is a cationic peptide with eighteen amino acid residues-rich in leucine and isoleucine, with an amidated C-terminus-and adopts an α-helical conformation in the presence of trifluoroethanol (TFE). It displayed activity against Gram-negative and especially Gram-positive bacteria, with MIC values ranging from 2 to 16 µM, and showed an IC<sub>50</sub> value of 15.9 µM against epimastigote forms of T. cruzi; however, Figanin 1 did not show activity against Candida species. This peptide also showed cytolytic effects against human erythrocytes with an HC<sub>50</sub> of 10 µM, in addition to antiproliferative activity against cancer cells and murine fibroblasts, with IC<sub>50</sub> values ranging from 10.5 to 13.7 µM. Despite its adverse effects on noncancerous cells, Figainin 1 exhibits interesting properties for the development of new anticancer agents and anti-infective drugs against pathogenic microorganisms.