dbacp07498
General Description
Peptide name : HX-12B
Source/Organism : Synthetic derivative of Temporin-Pta
Linear/Cyclic : Linear
Chirality : L
Sequence Information
Sequence : FFRKVLKLIRKIF
Peptide length: 13
C-terminal modification: Linear
N-terminal modification : Free
Non-natural peptide information:
Activity Information
Assay type : MTT assay
Assay time : 72-h
Activity : IC50 = 7.61 μM
Cell line : KB-C2
Cancer type : Cervical Cancer
Other activity : Antimicrobial
Physicochemical Properties
Amino acid composition bar chart :
Molecular mass : 1708.1864 Dalton
Aliphatic index : 1.423
Instability index : -16.892
Hydrophobicity (GRAVY) : 0.6538
Isoelectric point : 12
Charge (pH 7) : 4.7571
Aromaticity : 23.07
Molar extinction coefficient (cysteine, cystine): (0, 0)
Hydrophobic/hydrophilic ratio : 1.6
hydrophobic moment : 1.3733
Missing amino acid : A,C,D,E,G,H,M,N,P,Q,S,T,W,Y
Most occurring amino acid : F
Most occurring amino acid frequency : 3
Least occurring amino acid : V
Least occurring amino acid frequency : 1
Structural Information
3D structure :
Secondary structure fraction (Helix, Turn, Sheet): (38., 0, 61.)
SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](N)Cc1ccccc1)C(C)C)[C@@H](C)CC)C(=O)N[C@@H](Cc1ccccc1)C(=O)O
Secondary Structure :
| Method | Prediction |
|---|---|
| GOR | HHHHHHHHHHHHE |
| Chou-Fasman (CF) | CCHHHHHHEECCC |
| Neural Network (NN) | HHHHHHHHHHHHH |
| Joint/Consensus | HHHHHHHHHHHHC |
Molecular Descriptors and ADMET Properties
Molecular Descriptors: Click here to download
ADMET Properties: Click here to download
Cross Referencing databases
CancerPPD : Not available
ApIAPDB : Not available
CancerPPD2 ID: 6539
Reference
1 : Luo X, et al. Antimicrobial Peptide Reverses ABCB1-Mediated Chemotherapeutic Drug Resistance. Front Pharmacol. 2020; 11:1208. doi: 10.3389/fphar.2020.01208
Literature
Paper title : Antimicrobial Peptide Reverses ABCB1-Mediated Chemotherapeutic Drug Resistance.
Doi : https://doi.org/10.3389/fphar.2020.01208
Abstract : Multidrug resistance (MDR) of tumor cells to chemotherapeutic agents is the main reason for the failure of cancer chemotherapy. Overexpression of ABCB1 transporter that actively pumps various drugs out of the cells has been considered a major contributing factor for MDR. Over the past decade, many antimicrobial peptides with antitumor activity have been identified or synthesized, and some antitumor peptides have entered the clinical practice. In this study, we report that peptide HX-12C has the effect of reversing ABCB1-mediated chemotherapy resistance. In ABCB1-overexpressing cells, nontoxic dose of peptide HX-12C inhibited drug resistance and increased the effective intracellular concentration of paclitaxel and other ABCB1 substrate drugs. The mechanism study showed that peptide HX-12C stimulated ABCB1 ATPase activity without changing the expression level and localization patterns of ABCB1. Molecular docking predicted the binding modes between peptide HX-12C and ABCB1. Overall, we found that peptide HX-12C reverses ABCB1-mediated MDR through interacting with ABCB1 and blocking its function without affecting the transporter's expression and cellular localization. Our findings suggest that this antimicrobial peptide may be used as a novel prospective cancer therapeutic strategy in combination with conventional anticancer agents.