dbACP: A Comprehensive Database of Anti-Cancer Peptides

dbacp08323

General Description

Peptide name : Sample Peptide 4 from US011339203B2

Source/Organism : Synthetic

Linear/Cyclic : Linear

Chirality : L

Sequence Information

Sequence : FLLISACWVISLILGGLPIMGWKKRTLRKNDRKKR

Peptide length: 35

C-terminal modification: Linear

N-terminal modification : Amidation

Non-natural peptide information:

Activity Information

Assay type : CCK-8 assay

Assay time : 48-h

Activity : Cell Viability = 85.6% at 25 μM

Cell line : CAKI-2

Cancer type : Renal Cancer

Other activity : Anticancer

Physicochemical Properties

Amino acid composition bar chart :

Molecular mass : 4112.0546 Dalton

Aliphatic index : 1.225

Instability index : 66.6429

Hydrophobicity (GRAVY) : 0.0743

Isoelectric point : 11.593

Charge (pH 7) : 7.7463

Aromaticity : 8.571

Molar extinction coefficient (cysteine, cystine): (1, 0)

Hydrophobic/hydrophilic ratio : 1.5

hydrophobic moment : -0.034

Missing amino acid : E,H,Q,Y

Most occurring amino acid : L

Most occurring amino acid frequency : 6

Least occurring amino acid : F

Least occurring amino acid frequency : 1

Structural Information

3D structure :

Secondary structure fraction (Helix, Turn, Sheet): (37., 22., 42.)

SMILES Notation: CC[C@H](C)[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@H](CS)NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)Cc1ccccc1)[C@@H](C)CC)C(C)C)[C@@H](C)CC)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](CCSC)C(=O)NCC(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O)[C@@H](C)O)[C@@H](C)CC

Secondary Structure :

Method Prediction
GOR EEEEHHHEEEEEEETCCCEHHHHHHHHHHHHHTHH
Chou-Fasman (CF) EEEECEEEEEEEEECEEEEHHHHHCHHHHHHHCCC
Neural Network (NN) HHHHHHHHHEEEECCCCCCCHHHCCCCCCCCCCCC
Joint/Consensus EEEECCCEEEEEEECCCCCHHHHHCHHHHHHHCCC

Molecular Descriptors and ADMET Properties

Molecular Descriptors: Click here to download

ADMET Properties: Click here to download

Cross Referencing databases

Pubmed Id :

Uniprot : Not available

PDB : Not available

CancerPPD : Not available

ApIAPDB : Not available

CancerPPD2 ID: 7819

Reference

Literature